Department Environmental Toxicology

Current master projects

Mechanistic insights into the toxicity of tire particles applying fish cell lines

Background
Tire and Road Wear Particles (TRWP), which are generated by the erosion of tires while driving, have recently been estimated as representing up to 28.3% of all primary microplastics released in the aquatic environment, for an estimated mass of 424 Ktons/year. This finding raises questions regarding the toxicological impact of these TRWP and associated chemicals on aquatic organisms.  
 

Aim
This study aims at determining the toxicity mechanisms induced by TRWP and associated chemicals to fish using different rainbow trout cell lines (Oncorhynchus mykiss).
 

Methods
We will use several rainbow trout cells lines (e.g., from gill, gut and brain), which will be subject to different exposure scenarios.

You will gain experience with routine cell culture techniques (how to work in sterile conditions and culture cells). You will moreover learn how to set up and perform different assays: cell viability assays to determine the cytotoxicity of chemicals (seeding cells using different substrates, exposure to chemicals and multi-endpoint viability assay), bioavailability assays to quantify how much of a chemical has entered the cells (mass spectrometry) and gene expression analysis (RT-PCR) to identify molecular mechanisms induced. Finally, you will learn how to produce, interpret and present scientific data.

If you are interested in this particular research topic and are excited to know more about environmental toxicology research in general, please contact Anna Toso or Kristin Schirmer.

This research will be performed at the department of Environmental Toxicology, Eawag, in Dübendorf.

Micropollutant biotransformation in the moderlieschen (Leucaspius delineatus), an endemic species of temperate ecosystems in Europe

Background
Chemical pollution in aquatic ecosystems is recognized as a major environmental threat, resulting in significant alterations to aquatic biodiversity. However, organisms are equipped with different mechanisms of defense that allow species to cope with chemical exposure. Among these mechanisms, biotransformation processes are of particular importance due to their role in detoxification and in reducing the bioaccumulation potential of chemicals. Nonetheless, previous studies in fish suggest that biotransformation ability differs significantly among taxonomic groups, leading to differential sensitivity to pollution across species.
Recently, the moderlieschen (Leucaspius delineatus) has been proposed as a potential model species in ecotoxicology, as it corresponds to an endemic fish species inhabiting temperate ecosystems in Europe with significant ecological value. However, almost no information exists regarding the performance and sensitivity of this fish species when challenged with chemical exposure. Therefore, this project aims to gain insight into the biotransformation ability of the moderlieschen and advance its applicability in assessing responses to chemical exposure in fish.

Aim
Determine the biotransformation ability of the moderlieschen (Leucaspius delineatus) towards micropollutants (e.g. pharmaceuticals and pesticides) using well-established in vitro methodologies.

Methods
The proposed project is established at the interface of toxicology, chemistry, cell biology, and ecology, and aims to implement well-established in vitro systems for the evaluation of biotransformation ability.
The activity of different biotransformation pathways will be evaluated by determining chemical clearance rates of select micropollutants, including pharmaceuticals and pesticides. Chemical clearance will be estimated via substrate depletion experiments using S9 sub-cellular (enzymatic) fractions isolated from fresh tissue as well as from cell lines established from the moderlieschen. Chemical analyses will be then conducted using state-of-the-art instrumentation, including high performance liquid chromatography (HPLC) coupled with high-resolution mass spectrometry (HRMS).
The methodologies in the proposed work will involve (i) isolation of enzymatic fractions, (ii) routine cell culture techniques, (iii) protein quantification, (iv) spectrophotometry, and (v) instrumental analysis (e.g. HPLC-HRMS).
Suitable candidates for this project are expected to hold a bachelor (BSc) degree in chemistry, biology, biochemistry, environmental science, or a related discipline. Moreover, candidates should have a strong interest for advancing animal alternatives in (eco)toxicology.
If you wish to apply, please send your most recent CV to Dr. Marco E. Franco  This work will be performed at the Department of Environmental Toxicology at Eawag in Dübendorf, Switzerland.

Contact

Prof. Dr. Kristin Schirmer Head of department Tel. +41 58 765 5266 Send Mail
Dr. Colette vom Berg Deputy head of department Tel. +41 58 765 5535 Send Mail

Teaching

We are actively involved in formal course instructions and thesis supervision.

 

Course Title
 
Course Number      Persons Involved
 

Ecotoxicology (ETHZ)
 

701-1312-00L

Kristin Schirmer, Elisabeth Janssen

Ecotoxicology Laboratory (ETHZ)

701-1330-00P

Kristin Schirmer, Colette vom Berg, Ksenia Groh

Introduction to Toxicology (ETHZ)
 

752-1300-01L

Kristin Schirmer, Colette vom Berg (together with Shana Sturla)

Sustainability and Water Resources  (ETHZ)

118-0111-00L

Darcy Molnar, Paolo Burlando
Kristin Schirmer